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Journal of Zhejiang University SCIENCE B

ISSN 1673-1581(Print), 1862-1783(Online), Monthly

Chryseobacterium chengduensis sp. nov. isolated from the air of captive giant panda enclosures in Chengdu, China

Abstract: A Gram-negative, aerobic, non-motile, rod-shaped bacterial strain, designated 25-1T, was isolated from the air inside giant panda enclosures at the Chengdu Research Base of Giant Panda Breeding, China. Strain 25-1T grew optimally at pH 7.0–8.0, at 28–30 °C and in the presence of NaCl concentrations from 0.0% to 0.5 %. 16S rRNA gene sequence analysis indicated that strain 25-1T belongs to the genus Chryseobacterium within the family Flavobacteriaceae and is related most closely to C. carnis G81T (96.4% similarity), C. lathyri RBA2-6T (95.8% similarity), and C. zeae JM1085T (95.8% similarity). Its genomic DNA G+C molar composition was 36.2%. The major cellular fatty acids were iso-C15:0 (44.0%), iso-C17:0 3OH (19.8%) and C16:1 ω7c/16:1 ω6c (12.7%). The only isoprenoid quinone was menaquinone 6 (MK-6). The major polar lipids were phosphatidylethanolamine, two unidentified amino lipids and two unidentified lipids. The DNA–DNA relatedness between strain 25-1T and C. lathyri RBA2-6T was 38%. Phenotypic, genotypic, and phylogenetic characteristics indicated that strain 25-1T is a novel member of the genus Chryseobacterium, for which the name C. chengduensis sp. nov. is proposed. The type strain is 25-1T (CCTCC AB2015133T=DSM 100396T).

Key words: Chryseobacterium chengduensis, Giant panda, 16S rRNA sequencing, Phylogenetic analysis, Strain 25-1T

Chinese Summary  <26> 分离自成都大熊猫兽舍空气中的一株金黄杆菌属新种的鉴定

目的:鉴定菌株25-1T是否是金黄杆菌属的一个新种。
创新点:首次从空气中分离到金黄杆菌属的新种。
方法:革兰氏染色镜检;磷钨酸染色然后透射电镜观察菌株25-1T形态结构;全自动生理生化鉴定系统(Phoenix™-100)与传统生理生化反应管相结合;H890气象色谱仪进行脂肪酸组分分析;薄板双相层析进行极性脂组分分析;反相高压液相色谱分析法进行呼吸琨组分分析;熔解温度法检测G+C摩尔含量;16S rRNA序列测定及系统发生分析。
结论:根据传统特征分类研究结果(形态特征、培养特性和生理生化特征)、化学分类研究结果(脂肪酸组分、极性脂组分和呼吸琨组分)和遗传特征分类研究结果(G+C摩尔含量、DNA同源性测定和16S rRNA序列测定及系统发生分析)得出菌株25-1T为金黄杆菌属的一个新种。

关键词组:成都源金黄杆菌;大熊猫;16S rRNA测序;系统发育树分析;菌株25-1T


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DOI:

10.1631/jzus.B1500214

CLC number:

S865

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On-line Access:

2016-08-04

Received:

2015-09-05

Revision Accepted:

2016-02-25

Crosschecked:

2016-07-13

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