CLC number: X172
On-line Access: 2024-08-27
Received: 2023-10-17
Revision Accepted: 2024-05-08
Crosschecked: 2015-09-17
Cited: 1
Clicked: 4332
Lu-jun Chai, Xia-wei Jiang, Fan Zhang, Bei-wen Zheng, Fu-chang Shu, Zheng-liang Wang, Qing-feng Cui, Han-ping Dong, Zhong-zhi Zhang, Du-jie Hou, Yue-hui She. Isolation and characterization of a crude oil degrading bacteria from formation water: comparative genomic analysis of environmental Ochrobactrum intermedium isolate versus clinical strains[J]. Journal of Zhejiang University Science B, 2015, 16(10): 865-874.
@article{title="Isolation and characterization of a crude oil degrading bacteria from formation water: comparative genomic analysis of environmental Ochrobactrum intermedium isolate versus clinical strains",
author="Lu-jun Chai, Xia-wei Jiang, Fan Zhang, Bei-wen Zheng, Fu-chang Shu, Zheng-liang Wang, Qing-feng Cui, Han-ping Dong, Zhong-zhi Zhang, Du-jie Hou, Yue-hui She",
journal="Journal of Zhejiang University Science B",
volume="16",
number="10",
pages="865-874",
year="2015",
publisher="Zhejiang University Press & Springer",
doi="10.1631/jzus.B1500029"
}
%0 Journal Article
%T Isolation and characterization of a crude oil degrading bacteria from formation water: comparative genomic analysis of environmental Ochrobactrum intermedium isolate versus clinical strains
%A Lu-jun Chai
%A Xia-wei Jiang
%A Fan Zhang
%A Bei-wen Zheng
%A Fu-chang Shu
%A Zheng-liang Wang
%A Qing-feng Cui
%A Han-ping Dong
%A Zhong-zhi Zhang
%A Du-jie Hou
%A Yue-hui She
%J Journal of Zhejiang University SCIENCE B
%V 16
%N 10
%P 865-874
%@ 1673-1581
%D 2015
%I Zhejiang University Press & Springer
%DOI 10.1631/jzus.B1500029
TY - JOUR
T1 - Isolation and characterization of a crude oil degrading bacteria from formation water: comparative genomic analysis of environmental Ochrobactrum intermedium isolate versus clinical strains
A1 - Lu-jun Chai
A1 - Xia-wei Jiang
A1 - Fan Zhang
A1 - Bei-wen Zheng
A1 - Fu-chang Shu
A1 - Zheng-liang Wang
A1 - Qing-feng Cui
A1 - Han-ping Dong
A1 - Zhong-zhi Zhang
A1 - Du-jie Hou
A1 - Yue-hui She
J0 - Journal of Zhejiang University Science B
VL - 16
IS - 10
SP - 865
EP - 874
%@ 1673-1581
Y1 - 2015
PB - Zhejiang University Press & Springer
ER -
DOI - 10.1631/jzus.B1500029
Abstract: In this study, we isolated an environmental clone of Ochrobactrum intermedium, strain 2745-2, from the formation water of Changqing oilfield in Shanxi, China, which can degrade crude oil. Strain 2745-2 is aerobic and rod-shaped with optimum growth at 42 °C and pH 5.5. We sequenced the genome and found a single chromosome of 4 800 175 bp, with a G+C content of 57.63%. Sixty RNAs and 4737 protein-coding genes were identified: many of the genes are responsible for the degradation, emulsification, and metabolizing of crude oil. A comparative genomic analysis with related clinical strains (M86, 229E, and LMG3301T) showed that genes involved in virulence, disease, defense, phages, prophages, transposable elements, plasmids, and antibiotic resistance are also present in strain 2745-2.
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