
CLC number:
On-line Access: 2024-08-27
Received: 2023-10-17
Revision Accepted: 2024-05-08
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Dongyun XIN, Yangyang BAI, Yi BI, Libang HE, Yuxin KANG, Chuanying PAN, Haijing ZHU, Hong CHEN, Lei QU, Xianyong LAN. Insertion/deletion variants within the IGF2BP2 gene identified in reported genome-wide selective sweep analysis reveal a correlation with goat litter size[J]. Journal of Zhejiang University Science B,in press.Frontiers of Information Technology & Electronic Engineering,in press.https://doi.org/10.1631/jzus.B2100079 @article{title="Insertion/deletion variants within the IGF2BP2 gene identified in reported genome-wide selective sweep analysis reveal a correlation with goat litter size", %0 Journal Article TY - JOUR
已报道的全基因组选择性消除分析中发现IGF2BP2基因的插入/缺失变异与山羊产羔数相关创新点:首次筛选、验证山羊IGF2BP2基因的InDel位点,确定其与山羊产羔性状的相关性及作用,为山羊经济性状改良及新品种培育提供理论依据。 方法:采用实时荧光定量聚合酶链式反应(qRT-PCR)方法分析IGF2BP2在单羔组和多羔组中的表达水平;通过PCR扩增-琼脂糖凝胶电泳在918只陕北白绒母山羊中鉴定IGF2BP2基因P4-Ins-13bp和P5-Del-12bp缺失/插入位点基因型,并进行测序以验证突变;利用SHEsis平台分析两个位点的连锁不平衡;采用方差分析(ANOVA)和χ2检验分析山羊IGF2BP2基因变异与产羔数的关系;并利用在线数据库预测转录因子(TF)和突变区域序列的结合。 结论:本研究发现,IGF2BP2的mRNA表达水平在单羔组明显高于多羔组。在陕北白绒母山羊中验证了IGF2BP2基因内的插入/缺失(indels),包括P4-Ins-13bp和P5-Del-12bp。χ2检验表明,P4-Ins-13bp基因型(χ2=14.479,P=0.006)在单羔和多羔组间分布差异显著;相关分析表明,P4-Ins-13bp与山羊产仔数显着相关(P=0.022),具有缺失/缺失(DD)基因型的山羊个体产仔数高于其他山羊。因此,IGF2BP2基因的P4-Ins-13bp突变可作为一种潜在的与繁殖性状显著相关的分子标记,以优化母羊繁殖力,提高山羊产业的经济效益。 关键词组: Darkslateblue:Affiliate; Royal Blue:Author; Turquoise:Article
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